STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JCZ1_GUITCSRP54 domain-containing protein. (377 aa)    
Predicted Functional Partners:
UBQ_RPS30e
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.973
L1JRX8_GUITC
SRP9-21 domain-containing protein.
   
 0.968
L1I976_GUITC
TPR_REGION domain-containing protein.
   
 0.967
L1IQL5_GUITC
Uncharacterized protein.
   
 0.967
L1IU67_GUITC
SRP54 domain-containing protein.
 
0.950
L1IZB6_GUITC
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.935
RPL23Ae
Large subunit ribosomal protein L23Ae, cytoplasmic; Belongs to the universal ribosomal protein uL23 family.
  
 0.927
RPS15Ae
Small subunit ribosomal protein S15Ae, cytoplasmic; Belongs to the universal ribosomal protein uS8 family.
  
 0.924
RPL11e
Large subunit ribosomal protein L11e, cytoplasmic; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.921
RPL5e
Large subunit ribosomal protein L5e, cytoplasmic.
  
 
 0.920
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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