STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JD28_GUITCMINDY_DUB domain-containing protein. (553 aa)    
Predicted Functional Partners:
L1I7B2_GUITC
Zink finger-like fusion protein.
   
   0.618
L1I8E8_GUITC
Ubiquitin/60s ribosomal protein L40 fusion protein.
   
   0.618
L1INU9_GUITC
Ubiquitin-superoxide dismutase fusion protein.
    
   0.469
L1IPI8_GUITC
High mobility group box fusion protein.
    
   0.469
L1IRB4_GUITC
Ubiquitin_small subunit ribosomal protein S27Ae fusion protein.
    
   0.469
L1JA52_GUITC
High mobility group box fusion protein.
    
   0.469
L1J018_GUITC
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.465
L1I6A7_GUITC
SET domain-containing protein.
    
 0.456
L1I8J6_GUITC
Rubis-subs-bind domain-containing protein.
    
 0.456
L1I9M8_GUITC
SET domain-containing protein.
    
 0.456
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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