STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JDB1_GUITCUncharacterized protein. (518 aa)    
Predicted Functional Partners:
L1J7A6_GUITC
Uncharacterized protein.
  
 0.976
L1JYV0_GUITC
RPOLD domain-containing protein.
    
 0.974
L1IZF6_GUITC
Uncharacterized protein.
   
 0.971
L1JIA2_GUITC
Uncharacterized protein.
   
 0.969
L1IS88_GUITC
RNA polymerase II subunit 9, RPB9.
    
 0.968
L1K422_GUITC
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.960
L1JND3_GUITC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.959
L1JF52_GUITC
Spt4 domain-containing protein.
    
 0.948
L1JUL1_GUITC
DNA-directed RNA polymerase II subunit, RPB4.
    
  0.945
L1I8H8_GUITC
RNA_pol_Rpb5_C domain-containing protein.
    
 0.937
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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