L1JH66_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1JH66_GUITC

Sushi domain-containing protein. (632 aa)

Predicted Functional Partners:

L1JU57_GUITC

0.531

L1ID03_GUITC

0.530

L1IZI2_GUITC

0.530

L1JA47_GUITC

0.529

L1JBN2_GUITC

0.529

L1I7N5_GUITC

0.528

L1IY30_GUITC

0.528

L1J917_GUITC

0.528

L1JFC3_GUITC

0.528

L1I8R5_GUITC

0.527

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1I7N5_GUITC	L1JH66_GUITC	L1I7N5	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.528
L1I8R5_GUITC	L1JH66_GUITC	L1I8R5	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.527
L1ID03_GUITC	L1JH66_GUITC	L1ID03	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.530
L1IY30_GUITC	L1JH66_GUITC	L1IY30	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.528
L1IZI2_GUITC	L1JH66_GUITC	L1IZI2	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.530
L1J917_GUITC	L1JH66_GUITC	L1J917	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.528
L1JA47_GUITC	L1JH66_GUITC	L1JA47	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.529
L1JBN2_GUITC	L1JH66_GUITC	L1JBN2	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.529
L1JFC3_GUITC	L1JH66_GUITC	L1JFC3	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.528
L1JH66_GUITC	L1I7N5_GUITC	L1JH66	L1I7N5	Sushi domain-containing protein.	Uncharacterized protein.	0.528
L1JH66_GUITC	L1I8R5_GUITC	L1JH66	L1I8R5	Sushi domain-containing protein.	Uncharacterized protein.	0.527
L1JH66_GUITC	L1ID03_GUITC	L1JH66	L1ID03	Sushi domain-containing protein.	Uncharacterized protein.	0.530
L1JH66_GUITC	L1IY30_GUITC	L1JH66	L1IY30	Sushi domain-containing protein.	Uncharacterized protein.	0.528
L1JH66_GUITC	L1IZI2_GUITC	L1JH66	L1IZI2	Sushi domain-containing protein.	Uncharacterized protein.	0.530
L1JH66_GUITC	L1J917_GUITC	L1JH66	L1J917	Sushi domain-containing protein.	Uncharacterized protein.	0.528
L1JH66_GUITC	L1JA47_GUITC	L1JH66	L1JA47	Sushi domain-containing protein.	Uncharacterized protein.	0.529
L1JH66_GUITC	L1JBN2_GUITC	L1JH66	L1JBN2	Sushi domain-containing protein.	Uncharacterized protein.	0.529
L1JH66_GUITC	L1JFC3_GUITC	L1JH66	L1JFC3	Sushi domain-containing protein.	Uncharacterized protein.	0.528
L1JH66_GUITC	L1JU57_GUITC	L1JH66	L1JU57	Sushi domain-containing protein.	Uncharacterized protein.	0.531
L1JU57_GUITC	L1JH66_GUITC	L1JU57	L1JH66	Uncharacterized protein.	Sushi domain-containing protein.	0.531