STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JI86_GUITCDNA-directed RNA polymerase II subunit RPB7. (183 aa)    
Predicted Functional Partners:
L1JRH5_GUITC
Uncharacterized protein.
    
 0.995
L1JF52_GUITC
Spt4 domain-containing protein.
   
 0.988
L1K422_GUITC
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.988
L1IS88_GUITC
RNA polymerase II subunit 9, RPB9.
   
 0.986
L1JUL1_GUITC
DNA-directed RNA polymerase II subunit, RPB4.
   
 0.986
L1JYV0_GUITC
RPOLD domain-containing protein.
   
 0.986
L1JND3_GUITC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.985
L1JJ42_GUITC
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.982
L1IMI9_GUITC
RTR1-type domain-containing protein.
    
 0.968
L1JSY4_GUITC
Uncharacterized protein.
    
  0.966
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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