STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JMD5_GUITCUncharacterized protein. (403 aa)    
Predicted Functional Partners:
L1JHJ9_GUITC
HotDog ACOT-type domain-containing protein.
      
 0.673
VPS46
Vacuolar protein sorting protein 46.
      
 0.649
VPS60
Vacuolar protein sorting protein 60.
      
 0.622
hsp90c
Heat shock protein Hsp90, cytosolic protein.
      
 0.616
VPS2A
Vacuolar protein sorting 2A.
      
 0.601
L1IN24_GUITC
SWIRM domain-containing protein.
   
 
 0.404
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.