STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JMT8_GUITCVigilin. (1504 aa)    
Predicted Functional Partners:
RPL13e
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.751
L1J482_GUITC
Uncharacterized protein.
   
 
 0.696
L1J826_GUITC
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.607
L1IPZ1_GUITC
KH domain-containing protein.
   
 
 0.476
L1IN25_GUITC
Uncharacterized protein.
   
  
 0.462
L1JGP4_GUITC
ThiF domain-containing protein.
    
 
 0.459
L1IJR9_GUITC
Calreticulin.
   
  
 0.448
L1I4U9_GUITC
WD_REPEATS_REGION domain-containing protein.
   
 
 0.446
RACK1
Small subunit ribosomal protein RACK1, cytoplasmic.
   
 
 0.446
L1I8M7_GUITC
WD_REPEATS_REGION domain-containing protein.
   
 
 0.446
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.