STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JNF0_GUITCIFRD domain-containing protein. (430 aa)    
Predicted Functional Partners:
UBQ_RPS30e
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.996
L1JBU2_GUITC
Uncharacterized protein.
    
  0.929
L1J3S7_GUITC
COMM domain-containing protein.
    
 0.858
L1J2M4_GUITC
COMM domain-containing protein.
    
 0.856
RPL8e
Large subunit ribosomal protein L8e, cytoplasmic.
   
 
 0.853
L1IZB6_GUITC
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.845
RPL18Ae
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
 
 0.842
RPL3e
Large subunit ribosomal protein L3e, cytoplasmic; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.840
RPL36e
Large subunit ribosomal protein L36e, cytoplasmic.
    
 
 0.839
RPS6e
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.836
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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