Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| L1IS88_GUITC | L1JF52_GUITC | L1IS88 | L1JF52 | RNA polymerase II subunit 9, RPB9. | Spt4 domain-containing protein. | 0.999 |
| L1IS88_GUITC | L1JND3_GUITC | L1IS88 | L1JND3 | RNA polymerase II subunit 9, RPB9. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| L1IS88_GUITC | L1JRH5_GUITC | L1IS88 | L1JRH5 | RNA polymerase II subunit 9, RPB9. | Uncharacterized protein. | 0.996 |
| L1IS88_GUITC | L1JUL1_GUITC | L1IS88 | L1JUL1 | RNA polymerase II subunit 9, RPB9. | DNA-directed RNA polymerase II subunit, RPB4. | 0.999 |
| L1IS88_GUITC | L1JW84_GUITC | L1IS88 | L1JW84 | RNA polymerase II subunit 9, RPB9. | Uncharacterized protein. | 0.894 |
| L1IS88_GUITC | L1JYV0_GUITC | L1IS88 | L1JYV0 | RNA polymerase II subunit 9, RPB9. | RPOLD domain-containing protein. | 0.999 |
| L1IS88_GUITC | L1K422_GUITC | L1IS88 | L1K422 | RNA polymerase II subunit 9, RPB9. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.999 |
| L1IS88_GUITC | Rpb1 | L1IS88 | L1JNL7 | RNA polymerase II subunit 9, RPB9. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.921 |
| L1IS88_GUITC | SPT16 | L1IS88 | L1ILI2 | RNA polymerase II subunit 9, RPB9. | FACT complex subunit spt16. | 0.984 |
| L1IS88_GUITC | SSRP1 | L1IS88 | L1I8W9 | RNA polymerase II subunit 9, RPB9. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.983 |
| L1JF52_GUITC | L1IS88_GUITC | L1JF52 | L1IS88 | Spt4 domain-containing protein. | RNA polymerase II subunit 9, RPB9. | 0.999 |
| L1JF52_GUITC | L1JND3_GUITC | L1JF52 | L1JND3 | Spt4 domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| L1JF52_GUITC | L1JRH5_GUITC | L1JF52 | L1JRH5 | Spt4 domain-containing protein. | Uncharacterized protein. | 0.998 |
| L1JF52_GUITC | L1JUL1_GUITC | L1JF52 | L1JUL1 | Spt4 domain-containing protein. | DNA-directed RNA polymerase II subunit, RPB4. | 0.999 |
| L1JF52_GUITC | L1JW84_GUITC | L1JF52 | L1JW84 | Spt4 domain-containing protein. | Uncharacterized protein. | 0.904 |
| L1JF52_GUITC | L1JYV0_GUITC | L1JF52 | L1JYV0 | Spt4 domain-containing protein. | RPOLD domain-containing protein. | 0.999 |
| L1JF52_GUITC | L1K422_GUITC | L1JF52 | L1K422 | Spt4 domain-containing protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.997 |
| L1JF52_GUITC | Rpb1 | L1JF52 | L1JNL7 | Spt4 domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.900 |
| L1JF52_GUITC | SPT16 | L1JF52 | L1ILI2 | Spt4 domain-containing protein. | FACT complex subunit spt16. | 0.995 |
| L1JF52_GUITC | SSRP1 | L1JF52 | L1I8W9 | Spt4 domain-containing protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.992 |
page 1 of 6