L1JNS2_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1JNS2_GUITC

Uncharacterized protein. (411 aa)

Predicted Functional Partners:

L1J6V5_GUITC

0.544

L1JKJ3_GUITC

0.540

L1JTG2_GUITC

0.528

L1J0D7_GUITC

0.509

L1J0T7_GUITC

0.509

L1K4H4_GUITC

0.509

L1IWM7_GUITC

0.501

L1IU80_GUITC

0.486

L1JDG2_GUITC

0.483

L1JAP7_GUITC

0.479

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1IU80_GUITC	L1JNS2_GUITC	L1IU80	L1JNS2	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.486
L1IWM7_GUITC	L1JAP7_GUITC	L1IWM7	L1JAP7	Uncharacterized protein.	Uncharacterized protein.	0.495
L1IWM7_GUITC	L1JDG2_GUITC	L1IWM7	L1JDG2	Uncharacterized protein.	Uncharacterized protein.	0.471
L1IWM7_GUITC	L1JKJ3_GUITC	L1IWM7	L1JKJ3	Uncharacterized protein.	GUN4 domain-containing protein.	0.438
L1IWM7_GUITC	L1JNS2_GUITC	L1IWM7	L1JNS2	Uncharacterized protein.	Uncharacterized protein.	0.501
L1IWM7_GUITC	L1JTG2_GUITC	L1IWM7	L1JTG2	Uncharacterized protein.	Uncharacterized protein.	0.484
L1J0D7_GUITC	L1JNS2_GUITC	L1J0D7	L1JNS2	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.509
L1J0T7_GUITC	L1JNS2_GUITC	L1J0T7	L1JNS2	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.509
L1J6V5_GUITC	L1JAP7_GUITC	L1J6V5	L1JAP7	Uncharacterized protein.	Uncharacterized protein.	0.480
L1J6V5_GUITC	L1JKJ3_GUITC	L1J6V5	L1JKJ3	Uncharacterized protein.	GUN4 domain-containing protein.	0.540
L1J6V5_GUITC	L1JNS2_GUITC	L1J6V5	L1JNS2	Uncharacterized protein.	Uncharacterized protein.	0.544
L1J6V5_GUITC	L1JTG2_GUITC	L1J6V5	L1JTG2	Uncharacterized protein.	Uncharacterized protein.	0.529
L1JAP7_GUITC	L1IWM7_GUITC	L1JAP7	L1IWM7	Uncharacterized protein.	Uncharacterized protein.	0.495
L1JAP7_GUITC	L1J6V5_GUITC	L1JAP7	L1J6V5	Uncharacterized protein.	Uncharacterized protein.	0.480
L1JAP7_GUITC	L1JDG2_GUITC	L1JAP7	L1JDG2	Uncharacterized protein.	Uncharacterized protein.	0.476
L1JAP7_GUITC	L1JKJ3_GUITC	L1JAP7	L1JKJ3	Uncharacterized protein.	GUN4 domain-containing protein.	0.519
L1JAP7_GUITC	L1JNS2_GUITC	L1JAP7	L1JNS2	Uncharacterized protein.	Uncharacterized protein.	0.479
L1JDG2_GUITC	L1IWM7_GUITC	L1JDG2	L1IWM7	Uncharacterized protein.	Uncharacterized protein.	0.471
L1JDG2_GUITC	L1JAP7_GUITC	L1JDG2	L1JAP7	Uncharacterized protein.	Uncharacterized protein.	0.476
L1JDG2_GUITC	L1JKJ3_GUITC	L1JDG2	L1JKJ3	Uncharacterized protein.	GUN4 domain-containing protein.	0.441