STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sRRM1RNA recognition motif 1. (199 aa)    
Predicted Functional Partners:
L1I7I0_GUITC
Uncharacterized protein.
   
 0.853
L1IFK2_GUITC
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
  
 0.744
L1JD13_GUITC
RRM domain-containing protein.
  
 
 0.718
L1JRP7_GUITC
RRM domain-containing protein.
  
 
 0.711
UBQ_RPS30e
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.696
L1J5W1_GUITC
Nuclear cap-binding protein subunit 2.
    
 0.661
L1IJA4_GUITC
Uncharacterized protein.
    
 0.658
L1ICL0_GUITC
Matrin-type domain-containing protein.
    
 0.657
L1JBG9_GUITC
RRM domain-containing protein.
    
 0.639
L1J233_GUITC
Translation initiation factor 2, gamma subunit.
   
 0.628
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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