L1JUJ6_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1JUJ6_GUITC

Uncharacterized protein. (589 aa)

Predicted Functional Partners:

L1IW17_GUITC

0.782

L1J4Q0_GUITC

0.745

L1IRN9_GUITC

0.729

L1JKX9_GUITC

0.727

L1IYZ7_GUITC

0.712

L1INK2_GUITC

0.710

L1JVQ2_GUITC

0.705

L1JQ19_GUITC

0.688

L1JXI2_GUITC

0.688

L1J2L9_GUITC

0.686

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1INK2_GUITC	L1IRN9_GUITC	L1INK2	L1IRN9	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.768
L1INK2_GUITC	L1IW17_GUITC	L1INK2	L1IW17	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.884
L1INK2_GUITC	L1IYZ7_GUITC	L1INK2	L1IYZ7	Uncharacterized protein.	Uncharacterized protein.	0.870
L1INK2_GUITC	L1J2L9_GUITC	L1INK2	L1J2L9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.893
L1INK2_GUITC	L1J4Q0_GUITC	L1INK2	L1J4Q0	Uncharacterized protein.	Uncharacterized protein.	0.900
L1INK2_GUITC	L1JKX9_GUITC	L1INK2	L1JKX9	Uncharacterized protein.	HTH OST-type domain-containing protein.	0.721
L1INK2_GUITC	L1JQ19_GUITC	L1INK2	L1JQ19	Uncharacterized protein.	Nop domain-containing protein.	0.790
L1INK2_GUITC	L1JUJ6_GUITC	L1INK2	L1JUJ6	Uncharacterized protein.	Uncharacterized protein.	0.710
L1INK2_GUITC	L1JVQ2_GUITC	L1INK2	L1JVQ2	Uncharacterized protein.	SF3b1 domain-containing protein.	0.683
L1INK2_GUITC	L1JXI2_GUITC	L1INK2	L1JXI2	Uncharacterized protein.	RRM domain-containing protein.	0.667
L1IRN9_GUITC	L1INK2_GUITC	L1IRN9	L1INK2	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.768
L1IRN9_GUITC	L1IW17_GUITC	L1IRN9	L1IW17	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.790
L1IRN9_GUITC	L1IYZ7_GUITC	L1IRN9	L1IYZ7	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.999
L1IRN9_GUITC	L1J2L9_GUITC	L1IRN9	L1J2L9	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	WD_REPEATS_REGION domain-containing protein.	0.627
L1IRN9_GUITC	L1J4Q0_GUITC	L1IRN9	L1J4Q0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.950
L1IRN9_GUITC	L1JQ19_GUITC	L1IRN9	L1JQ19	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Nop domain-containing protein.	0.999
L1IRN9_GUITC	L1JUJ6_GUITC	L1IRN9	L1JUJ6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Uncharacterized protein.	0.729
L1IW17_GUITC	L1INK2_GUITC	L1IW17	L1INK2	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.884
L1IW17_GUITC	L1IRN9_GUITC	L1IW17	L1IRN9	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.790
L1IW17_GUITC	L1IYZ7_GUITC	L1IW17	L1IYZ7	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.806