STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JVF8_GUITCDUF1995 domain-containing protein. (325 aa)    
Predicted Functional Partners:
Lhcr3
Light-harvesting Chl a protein 3.
  
     0.524
Lhcr7
Light-harvesting Chl a protein 7.
  
     0.523
Lhcr6
Light-harvesting Chl a protein 6.
  
     0.521
Lhcr16
Light-harvesting Chl a protein 16.
  
     0.519
Lhcr14
Light-harvesting Chl a protein 14.
  
     0.518
Lhcr13
Light-harvesting Chl a protein 13.
  
     0.518
Lhcr11
Light-harvesting Chl a protein 11.
  
     0.517
Lhcr10
Light-harvesting Chl a protein 10.
  
     0.514
Lhcr9
Light-harvesting Chl a protein 9.
  
     0.512
Lhcr12
Light-harvesting Chl a protein 12.
  
     0.512
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.