STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS53Vacuolar protein sorting 53. (498 aa)    
Predicted Functional Partners:
VPS54
Vacuolar protein sorting 54.
   
 0.999
ANG2
Ang2 protein.
    
 0.999
VPS52A
Vacuolar protein sorting 52A.
   
 0.979
VPS52B
Vacuolar protein sorting 52B.
   
 0.979
COG4
Component of oligomeric golgi complex 4.
   
 
 0.974
COG8
Oligomeric Golgi complex component 8.
   
 
 0.962
COG3
Oligomeric Golgi complex component 3.
   
 
 0.960
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.959
L1I4P8_GUITC
Uncharacterized protein.
    
 
 0.958
L1IWL4_GUITC
Uncharacterized protein.
    
 
 0.958
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.