STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JX77_GUITCUncharacterized protein. (1089 aa)    
Predicted Functional Partners:
L1JUL1_GUITC
DNA-directed RNA polymerase II subunit, RPB4.
   
 0.964
L1JRH5_GUITC
Uncharacterized protein.
    
 0.961
L1JYV0_GUITC
RPOLD domain-containing protein.
   
 0.960
L1K422_GUITC
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.960
L1IS88_GUITC
RNA polymerase II subunit 9, RPB9.
   
 0.958
L1JND3_GUITC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.958
L1JF52_GUITC
Spt4 domain-containing protein.
   
 0.954
L1JJ42_GUITC
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.940
ERCC3
ERCC3/XPB/SSL2/Rad25 nucleotide excision repair.
    
 0.929
L1JI33_GUITC
DNA-directed RNA polymerase subunit.
  
 0.928
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.