STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCC1Defective in sister chromatid cohesion 1. (335 aa)    
Predicted Functional Partners:
CTF8
Chromosome transmission fidelity protein 8.
   
 0.999
RFC3
Replication factor C subunit 3.
   
 0.991
CTF18
Chromosome transmission fidelity protein 18.
   
 0.988
L1K4J7_GUITC
Uncharacterized protein.
   
 0.988
POLE1
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.983
L1J5D3_GUITC
AAA domain-containing protein.
   
 0.966
RFC5
Replication factor C subunit 4.
   
 0.961
L1ITG4_GUITC
Replication factor C, subunit RFC4.
   
 0.961
POLA1
DNA polymerase.
   
 0.904
POLA4
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.891
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.