STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSL1Centromere/kinetochore protein zw10. (784 aa)    
Predicted Functional Partners:
UBQ_RPS30e
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.996
L1JE06_GUITC
Diphthami_syn_2 domain-containing protein.
   
 0.965
L1JAG2_GUITC
Sde2_N_Ubi domain-containing protein.
   
 0.950
RPL5e
Large subunit ribosomal protein L5e, cytoplasmic.
  
 0.949
RPS15Ae
Small subunit ribosomal protein S15Ae, cytoplasmic; Belongs to the universal ribosomal protein uS8 family.
  
 0.949
RPL11e
Large subunit ribosomal protein L11e, cytoplasmic; Belongs to the universal ribosomal protein uL5 family.
  
 0.949
RPS3e
Small subunit ribosomal protein S3e, cytoplasmic.
  
 0.949
RPL23Ae
Large subunit ribosomal protein L23Ae, cytoplasmic; Belongs to the universal ribosomal protein uL23 family.
  
 0.948
RPS20e
Small subunit ribosomal protein S20e, cytoplasmic.
  
 0.948
RPL17e
Large subunit ribosomal protein L17e, cytoplasmic; Belongs to the universal ribosomal protein uL22 family.
  
 0.948
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.