STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS60Vacuolar protein sorting protein 60. (223 aa)    
Predicted Functional Partners:
VTA1
Vps20-associated 1.
   
 0.999
VPS4
Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.
   
 0.994
VPS46
Vacuolar protein sorting protein 46.
   
 
 0.993
VPS2A
Vacuolar protein sorting 2A.
  
 0.991
L1IRR7_GUITC
Uncharacterized protein.
    
 
 0.975
VPS24
Vacuolar protein sorting protein 24.
   
 0.970
VPS2B
Vacuolar protein sorting 2B.
   
 0.968
VPS32
Vacuolar protein sorting protein 32.
  
0.937
L1I6G4_GUITC
Uncharacterized protein.
   
 0.933
L1IG09_GUITC
Uncharacterized protein.
   
 0.933
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.