STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS45BVacuolar protein sorting 45B; Belongs to the STXBP/unc-18/SEC1 family. (591 aa)    
Predicted Functional Partners:
L1JVY2_GUITC
Uncharacterized protein.
    
 0.998
STX16
Syntaxin 16; Belongs to the syntaxin family.
    
 
 0.959
VTI1
Vesicle transport through interaction with t-snares 1.
   
 
 0.928
VPS45A
Vacuolar protein sorting 45A; Belongs to the STXBP/unc-18/SEC1 family.
  
  
 
0.908
L1J9J8_GUITC
Qc-snare.
    
 
 0.899
L1IYS0_GUITC
GIDA_assoc domain-containing protein.
 
      0.891
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.814
L1I5X9_GUITC
Uncharacterized protein.
    
 0.805
L1J6D4_GUITC
Uncharacterized protein.
    
 0.805
L1JRP4_GUITC
Pep3_Vps18 domain-containing protein.
    
 0.793
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.