STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTA1Vps20-associated 1. (327 aa)    
Predicted Functional Partners:
VPS4
Vacuolar protein sorting protein 4; Belongs to the AAA ATPase family.
   
 0.999
VPS46
Vacuolar protein sorting protein 46.
    
 0.999
VPS60
Vacuolar protein sorting protein 60.
   
 0.999
L1INU7_GUITC
GTP_cyclohydroI domain-containing protein.
   
   0.990
L1IRR7_GUITC
Uncharacterized protein.
   
 
 0.989
L1J322_GUITC
Uncharacterized protein.
   
   0.989
L1ITK5_GUITC
Uncharacterized protein.
    
   0.916
L1IA78_GUITC
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
  0.900
VPS24
Vacuolar protein sorting protein 24.
    
 0.875
VPS2B
Vacuolar protein sorting 2B.
    
 0.870
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.