Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUDT5Nudix hydrolase 5. (191 aa)    
Predicted Functional Partners:
NUDT9
Nudix hydrolase 9.
    
 0.975
NUDT15
Nudix hydrolase 15.
  
 
 0.937
ENSPCLP00000011301
annotation not available
   
   0.915
CDC123
Cell division cycle 123.
   
 
 0.914
PGM1
Phosphoglucomutase 1.
   
 
 0.906
PRPS2
Phosphoribosyl pyrophosphate synthetase 2.
    
 0.902
ENSPCLP00000010121
annotation not available
    
 0.902
PGM2
Phosphoglucomutase 2.
    
  0.901
ADPRM
ADP-ribose/CDP-alcohol diphosphatase, manganese dependent.
    
 0.901
PPAT
Phosphoribosyl pyrophosphate amidotransferase.
   
   0.864
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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