Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMD4AFERM domain containing 4A. (1078 aa)    
Predicted Functional Partners:
ENSPCLP00000011883
annotation not available
      
 0.729
CYTH4
Cytohesin 4.
    
 
 0.690
CYTH1
Cytohesin 1.
    
 
 0.641
CYTH3
Cytohesin 3.
    
 
 0.641
PLEKHA5
Pleckstrin homology domain containing A5.
    
 
 0.626
SH3BGRL
SH3 domain binding glutamate rich protein like.
      
 0.559
PIPOX
Pipecolic acid and sarcosine oxidase.
      
 0.559
ARHGAP23
Rho GTPase activating protein 23.
  
   
 0.557
RNF157
Ring finger protein 157.
      
 0.557
STK35
Serine/threonine kinase 35.
      
 0.556
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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