Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DMTF1Cyclin D binding myb like transcription factor 1. (901 aa)    
Predicted Functional Partners:
CCDC59
Coiled-coil domain containing 59.
     
  0.908
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
 
 0.787
ENSPCLP00000010173
annotation not available
    
 
 0.718
ARMC1
Armadillo repeat containing 1.
      
 0.701
RFX3
Regulatory factor X3.
    
   0.675
RFX2
Regulatory factor X2.
    
   0.675
POLR1C
RNA polymerase I and III subunit C.
    
  0.642
POLR1E
RNA polymerase I subunit E.
    
 0.620
ENSPCLP00000003604
annotation not available
      
 0.615
TDRD3
Tudor domain containing 3.
      
 0.611
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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