STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCLOPiccolo presynaptic cytomatrix protein. (5156 aa)    
Predicted Functional Partners:
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.829
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.809
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.736
RAB3A
RAB3A, member RAS oncogene family.
     
 0.621
BSN
Bassoon presynaptic cytomatrix protein.
  
0.621
RHOJ
Ras homolog family member J.
    
 0.612
RANBP2
RAN binding protein 2.
    
 0.589
GIT2
GIT ArfGAP 2.
    
 
 0.583
DPP10
Dipeptidyl peptidase like 10.
   
 
 0.577
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
0.565
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.