Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM60Transmembrane protein 60. (134 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
      
 0.653
ENSPCLP00000013085
annotation not available
      
 0.641
ENSPCLP00000011817
annotation not available
      
 0.581
PPIG
Peptidylprolyl isomerase G.
      
 0.577
TPD52L2
TPD52 like 2.
      
 0.567
LARP4B
La ribonucleoprotein 4B.
      
 0.555
TMEM50B
Transmembrane protein 50B.
      
 0.555
TMEM120B
Transmembrane protein 120B.
      
 0.507
TMEM120A
Transmembrane protein 120A.
      
 0.450
CASC3
CASC3 exon junction complex subunit.
      
 0.450
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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