Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM185AFamily with sequence similarity 185 member A. (367 aa)    
Predicted Functional Partners:
PEX13
Peroxisomal biogenesis factor 13.
   
 0.932
ENSPCLP00000020872
annotation not available
   
 0.929
PEX7
Peroxisomal biogenesis factor 7.
    
 0.928
PEX10
Peroxisomal biogenesis factor 10.
    
 0.928
PEX12
Peroxisomal biogenesis factor 12.
    
 0.927
PEX6
Peroxisomal biogenesis factor 6.
    
 0.909
ENSPCLP00000002616
annotation not available
   
 0.907
PEX1
Peroxisomal biogenesis factor 1.
    
 0.905
PEX2
Peroxisomal biogenesis factor 2.
    
 0.902
SEMA7A
Semaphorin 7A (John Milton Hagen blood group).
    
   0.881
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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