Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBED4Zinc finger BED-type containing 4. (1172 aa)    
Predicted Functional Partners:
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
    
 
 0.863
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.758
PIM3
Pim-3 proto-oncogene, serine/threonine kinase.
      
 0.568
PNPLA4
Patatin like phospholipase domain containing 4.
      
 0.567
SHROOM2
Shroom family member 2.
    
 
 0.566
PUDP
Pseudouridine 5'-phosphatase.
      
 0.563
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
      
 0.560
MRM1
Mitochondrial rRNA methyltransferase 1.
      
 0.559
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
 0.558
GTPBP6
GTP binding protein 6 (putative).
   
  
 0.558
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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