Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRABDTraB domain containing. (374 aa)    
Predicted Functional Partners:
WDYHV1
WDYHV motif containing 1.
      
 0.925
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.924
COPZ1
Coatomer protein complex subunit zeta 1.
      
 0.923
ENSPCLP00000024756
annotation not available
      
 0.767
CEP76
Centrosomal protein 76.
      
 0.700
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.672
PRR15L
Proline rich 15 like.
      
 0.615
QPCT
Glutaminyl-peptide cyclotransferase.
      
 0.611
ATP4B
ATPase H+/K+ transporting subunit beta.
      
 0.597
TBC1D22A
TBC1 domain family member 22A.
      
 0.593
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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