Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HDAC10Histone deacetylase 10. (714 aa)    
Predicted Functional Partners:
HDAC11
Histone deacetylase 11.
    
 
 0.780
ARID4B
AT-rich interaction domain 4B.
    
 0.767
ARID4A
AT-rich interaction domain 4A.
    
 0.767
NME8
NME/NM23 family member 8.
   
 
 0.741
MEF2D
Myocyte enhancer factor 2D.
    
 
 0.740
WDR90
WD repeat domain 90.
    
 0.732
RANBP2
RAN binding protein 2.
    
 0.720
SIRT1
Sirtuin 1.
    
 0.677
ENSPCLP00000016642
annotation not available
   
 0.674
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.654
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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