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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC10Histone deacetylase 10. (714 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.945
ARID4A
AT-rich interaction domain 4A.
    
 0.945
HDAC11
Histone deacetylase 11.
    
0.858
KDM2B
Lysine demethylase 2B.
    
 0.830
KDM2A
Lysine demethylase 2A.
    
 0.830
SIN3A
SIN3 transcription regulator family member A.
    
 0.722
SIN3B
SIN3 transcription regulator family member B.
    
 0.722
MACROH2A1
macroH2A.1 histone.
    
 0.712
MACROH2A2
macroH2A.2 histone.
    
 0.712
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.659
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.