Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAPK12Mitogen-activated protein kinase 12. (361 aa)    
Predicted Functional Partners:
PTPN3
Protein tyrosine phosphatase non-receptor type 3.
    
 0.996
MAPKAPK2
MAPK activated protein kinase 2.
  
 
0.995
MAPK13
Mitogen-activated protein kinase 13.
  
 
0.995
MAPK14
Mitogen-activated protein kinase 14.
  
 
0.993
MAPKAPK3
MAPK activated protein kinase 3.
  
 
0.990
MAP2K6
Mitogen-activated protein kinase kinase 6.
  
 
0.984
MAP2K3
Mitogen-activated protein kinase kinase 3.
  
 
0.984
ATF2
Activating transcription factor 2.
    
 0.981
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
    
 0.976
MEF2C
Myocyte enhancer factor 2C.
    
 0.974
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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