STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQUBIQ motif and ubiquitin domain containing. (736 aa)    
Predicted Functional Partners:
ANKRD42
Ankyrin repeat domain 42.
   
  0.683
MED31
Mediator complex subunit 31.
    
  0.661
ARMC3
Armadillo repeat containing 3.
   
 
 0.660
MED14
Mediator complex subunit 14.
    
  0.642
MED21
Mediator complex subunit 21.
    
  0.642
MED7
Mediator complex subunit 7.
    
  0.642
ARMC4
Armadillo repeat containing 4.
  
 
 0.639
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.621
C9orf116
Chromosome 9 open reading frame 116.
      
 0.543
C4orf47
Chromosome 4 open reading frame 47.
      
 0.541
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.