Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQUBIQ motif and ubiquitin domain containing. (736 aa)    
Predicted Functional Partners:
C4orf47
Chromosome 4 open reading frame 47.
   
 
 0.976
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.973
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.971
C5orf49
Chromosome 5 open reading frame 49.
    
 
 0.934
IQCD
IQ motif containing D.
   
 
 0.920
ENSPCLP00000002093
annotation not available
    
 
 0.917
RSPH14
Radial spoke head 14 homolog.
   
 
 0.917
RSPH1
Radial spoke head component 1.
   
 
 0.916
ARMC3
Armadillo repeat containing 3.
   
 
 0.915
RSPH3
Radial spoke head 3.
   
 
 0.914
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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