STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM3CFamily with sequence similarity 3 member C. (227 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
     
 0.599
CPED1
Cadherin like and PC-esterase domain containing 1.
      
 0.567
TMEM126A
Transmembrane protein 126A.
      
 0.562
HDGFL2
HDGF like 2.
      
 0.553
WDR72
WD repeat domain 72.
      
 0.543
FAM83H
Family with sequence similarity 83 member H.
      
 0.543
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
      
 0.477
CPNE1
Copine 1.
      
 0.477
IST1
IST1 factor associated with ESCRT-III.
      
 0.477
POMT2
Protein O-mannosyltransferase 2.
     
 0.473
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.