Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPED1Cadherin like and PC-esterase domain containing 1. (1058 aa)    
Predicted Functional Partners:
FAM3C
Family with sequence similarity 3 member C.
      
 0.623
ING3
Inhibitor of growth family member 3.
      
 0.579
FAM210A
Family with sequence similarity 210 member A.
      
 0.557
PDCL2
Phosducin like 2.
      
 0.555
PDCL3
Phosducin like 3.
      
 0.555
EPDR1
Ependymin related 1.
      
 0.494
WNT16
Wnt family member 16.
      
 0.464
NELFCD
Negative elongation factor complex member C/D.
      
 0.448
STARD3NL
STARD3 N-terminal like.
      
 0.447
UPB1
Beta-ureidopropionase 1.
      
 0.444
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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