Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN12Tetraspanin 12. (305 aa)    
Predicted Functional Partners:
ENSPCLP00000008473
annotation not available
    
 
 0.872
FZD4
Frizzled class receptor 4.
   
 
 0.825
DOCK7
Dedicator of cytokinesis 7.
      
 0.760
RECK
Reversion inducing cysteine rich protein with kazal motifs.
      
 0.732
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
      
 0.625
JAG1
Jagged canonical Notch ligand 1.
     
 0.615
KIF11
Kinesin family member 11.
      
 0.615
ENSPCLP00000017164
annotation not available
      
 0.615
DOCK8
Dedicator of cytokinesis 8.
      
 0.567
ARHGAP30
Rho GTPase activating protein 30.
      
 0.564
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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