Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CACNA1DCalcium voltage-gated channel subunit alpha1 D. (2184 aa)    
Predicted Functional Partners:
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
  
 
 
0.954
CACNA2D1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.938
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.938
RYR2
Ryanodine receptor 2.
   
 0.936
RYR3
Ryanodine receptor 3.
   
 0.930
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.925
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
  
  
 
0.901
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.870
ENSPCLP00000004299
annotation not available
    
 0.861
ENSPCLP00000016355
annotation not available
    
 0.861
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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