Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF2PHD finger protein 2. (1061 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.739
ARID5B
AT-rich interaction domain 5B.
    
 0.736
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
 0.725
SUV39H1
Suppressor of variegation 3-9 homolog 1.
    
 0.725
RNF2
Ring finger protein 2.
    
 
 0.682
H4C8
H4 clustered histone 8.
    
 0.660
ENSPCLP00000010729
annotation not available
    
 0.660
ENSPCLP00000010736
annotation not available
    
 0.660
JARID2
Jumonji and AT-rich interaction domain containing 2.
   
 
 0.637
ENSPCLP00000001939
annotation not available
    
 0.615
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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