STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARX1BARX homeobox 1. (100 aa)    
Predicted Functional Partners:
NKX3-2
NK3 homeobox 2.
   
  
0.742
MSX1
Msh homeobox 1.
   
  
0.626
LHX6
LIM homeobox 6.
    
 
 0.615
LHX8
LIM homeobox 8.
    
 
 0.600
DLX1
Distal-less homeobox 1.
    
 
0.583
TBX22
T-box transcription factor 22.
    
 
 0.576
PAX9
Paired box 9.
      
 0.566
BMP4
Bone morphogenetic protein 4.
      
 0.566
HAND2
Heart and neural crest derivatives expressed 2.
      
 0.565
FGF8
Fibroblast growth factor 8.
      
 0.543
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.