Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BARX1BARX homeobox 1. (100 aa)    
Predicted Functional Partners:
IL10RB
Interleukin 10 receptor subunit beta.
    
 
 0.612
MYOM2
Myomesin 2.
      
 0.604
PAX9
Paired box 9.
      
 0.589
FOXF2
Forkhead box F2.
    
 
 0.567
NKX3-2
NK3 homeobox 2.
      
 0.566
LHX8
LIM homeobox 8.
    
 
 0.565
LHX6
LIM homeobox 6.
    
 
 0.565
DAG1
Dystroglycan 1.
      
 0.557
FOXI2
Forkhead box I2.
    
 
 0.556
FOXI1
Forkhead box I1.
    
 
 0.556
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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