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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM33RNA binding motif protein 33. (1193 aa)    
Predicted Functional Partners:
NOM1
Nucleolar protein with MIF4G domain 1.
      
 0.766
RNF32
Ring finger protein 32.
      
 0.761
FGGY
FGGY carbohydrate kinase domain containing.
    
 0.501
PGBD5
piggyBac transposable element derived 5.
    
 
 0.500
FAM83C
Family with sequence similarity 83 member C.
      
 0.487
SAMD11
Sterile alpha motif domain containing 11.
      
 0.485
EN2
Engrailed homeobox 2.
      
 0.477
USP24
Ubiquitin specific peptidase 24.
   
 
 0.448
ENSPCLP00000017892
annotation not available
     
 0.425
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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