Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOM1Nucleolar protein with MIF4G domain 1. (828 aa)    
Predicted Functional Partners:
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.982
WDR3
WD repeat domain 3.
   
 
 0.982
DDX10
DEAD-box helicase 10.
   
 
 0.980
NAT10
N-acetyltransferase 10.
   
   0.966
UTP6
UTP6 small subunit processome component.
   
 
 0.965
UTP4
UTP4 small subunit processome component.
   
   0.963
NOC4L
Nucleolar complex associated 4 homolog.
   
   0.960
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 
 0.958
UTP3
UTP3 small subunit processome component.
   
 
 0.956
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.952
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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