Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MNX1Motor neuron and pancreas homeobox 1. (347 aa)    
Predicted Functional Partners:
TBX20
T-box transcription factor 20.
    
 
 0.664
PTF1A
Pancreas associated transcription factor 1a.
    
 
 0.623
VIPR1
Vasoactive intestinal peptide receptor 1.
      
 0.618
ISL1
ISL LIM homeobox 1.
    
 0.616
TSPAN2
Tetraspanin 2.
      
 0.605
RFX4
Regulatory factor X4.
      
 0.600
LHX3
LIM homeobox 3.
    
 
 0.588
GLIS3
GLIS family zinc finger 3.
    
 
 0.572
POU1F1
POU class 1 homeobox 1.
    
 
 0.564
ENSPCLP00000014929
annotation not available
      
 0.558
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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