Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLF6Kruppel like factor 6. (283 aa)    
Predicted Functional Partners:
SP1
Sp1 transcription factor.
    
  0.955
KLF7
Kruppel like factor 7.
   
    0.857
E2F1
E2F transcription factor 1.
    
 
 0.792
TIPARP
TCDD inducible poly(ADP-ribose) polymerase.
    
 
 0.670
CYP1B1
Cytochrome P450 family 1 subfamily B member 1.
    
 
 0.657
APTX
Aprataxin.
      
 0.652
SPATA20
Spermatogenesis associated 20.
      
 0.650
SYT13
Synaptotagmin 13.
      
 0.627
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
   
 
 0.621
PTN
Pleiotrophin.
      
 0.614
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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