Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RYR2Ryanodine receptor 2. (4950 aa)    
Predicted Functional Partners:
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 0.966
CASQ2
Calsequestrin 2.
   
 0.949
ENSPCLP00000004299
annotation not available
    
 0.947
ENSPCLP00000016355
annotation not available
    
 0.947
CASQ1
Calsequestrin 1.
   
 0.938
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
   
 0.936
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 0.936
ASPH
Aspartate beta-hydroxylase.
   
 
 0.921
ENSPCLP00000013901
annotation not available
    
 0.916
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
    
 0.913
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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