Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGB1Integrin subunit beta 1. (803 aa)    
Predicted Functional Partners:
ITGA4
Integrin subunit alpha 4.
   
 0.989
ITGA3
Integrin subunit alpha 3.
   
 0.987
ILK
Integrin linked kinase.
    
 0.987
ITGAV
Integrin subunit alpha V.
   
 0.987
ITGA1
Integrin subunit alpha 1.
   
 0.984
ITGA9
Integrin subunit alpha 9.
   
 0.983
ITGA6
Integrin subunit alpha 6.
   
 0.973
ITGA2
Integrin subunit alpha 2.
   
 0.972
PTK2
Protein tyrosine kinase 2.
   
 0.969
ENSPCLP00000025420
annotation not available
    
 0.967
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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