KIF5B protein (Phasianus colchicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

KIF5B

Kinesin family member 5B. (966 aa)

Predicted Functional Partners:

ENSPCLP00000006274

0.992

ENSPCLP00000014177

0.991

KIF5C

0.901

PLEKHM2

0.900

ENSPCLP00000007143

0.847

ENSPCLP00000004707

0.818

ENSPCLP00000004708

0.818

ENSPCLP00000011660

0.818

ENSPCLP00000012906

0.818

ENSPCLP00000019746

0.818

Your Current Organism:

Phasianus colchicus

NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCLP00000004707	ENSPCLP00000006274	ENSPCLP00000004707	ENSPCLP00000006274	annotation not available	annotation not available	0.693
ENSPCLP00000004707	ENSPCLP00000007143	ENSPCLP00000004707	ENSPCLP00000007143	annotation not available	annotation not available	0.736
ENSPCLP00000004707	ENSPCLP00000014177	ENSPCLP00000004707	ENSPCLP00000014177	annotation not available	annotation not available	0.693
ENSPCLP00000004707	KIF5B	ENSPCLP00000004707	ENSPCLP00000001244	annotation not available	Kinesin family member 5B.	0.818
ENSPCLP00000004707	KIF5C	ENSPCLP00000004707	ENSPCLP00000006957	annotation not available	Kinesin family member 5C.	0.818
ENSPCLP00000004708	ENSPCLP00000006274	ENSPCLP00000004708	ENSPCLP00000006274	annotation not available	annotation not available	0.693
ENSPCLP00000004708	ENSPCLP00000007143	ENSPCLP00000004708	ENSPCLP00000007143	annotation not available	annotation not available	0.736
ENSPCLP00000004708	ENSPCLP00000014177	ENSPCLP00000004708	ENSPCLP00000014177	annotation not available	annotation not available	0.693
ENSPCLP00000004708	KIF5B	ENSPCLP00000004708	ENSPCLP00000001244	annotation not available	Kinesin family member 5B.	0.818
ENSPCLP00000004708	KIF5C	ENSPCLP00000004708	ENSPCLP00000006957	annotation not available	Kinesin family member 5C.	0.818
ENSPCLP00000006274	ENSPCLP00000004707	ENSPCLP00000006274	ENSPCLP00000004707	annotation not available	annotation not available	0.693
ENSPCLP00000006274	ENSPCLP00000004708	ENSPCLP00000006274	ENSPCLP00000004708	annotation not available	annotation not available	0.693
ENSPCLP00000006274	ENSPCLP00000007143	ENSPCLP00000006274	ENSPCLP00000007143	annotation not available	annotation not available	0.598
ENSPCLP00000006274	ENSPCLP00000011660	ENSPCLP00000006274	ENSPCLP00000011660	annotation not available	annotation not available	0.695
ENSPCLP00000006274	ENSPCLP00000012906	ENSPCLP00000006274	ENSPCLP00000012906	annotation not available	annotation not available	0.694
ENSPCLP00000006274	ENSPCLP00000014177	ENSPCLP00000006274	ENSPCLP00000014177	annotation not available	annotation not available	0.901
ENSPCLP00000006274	ENSPCLP00000019746	ENSPCLP00000006274	ENSPCLP00000019746	annotation not available	annotation not available	0.693
ENSPCLP00000006274	KIF5B	ENSPCLP00000006274	ENSPCLP00000001244	annotation not available	Kinesin family member 5B.	0.992
ENSPCLP00000006274	KIF5C	ENSPCLP00000006274	ENSPCLP00000006957	annotation not available	Kinesin family member 5C.	0.991
ENSPCLP00000006274	PLEKHM2	ENSPCLP00000006274	ENSPCLP00000025374	annotation not available	Pleckstrin homology and RUN domain containing M2.	0.902