Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPN3Opsin 3. (395 aa)    
Predicted Functional Partners:
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta.
    
   0.974
EIF2B3
Eukaryotic translation initiation factor 2B subunit gamma.
    
   0.959
EIF2B4
Eukaryotic translation initiation factor 2B subunit delta.
    
   0.953
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
    
   0.939
GNB1
G protein subunit beta 1.
    
 0.758
GNB4
G protein subunit beta 4.
    
 0.758
SPARC
Secreted protein acidic and cysteine rich.
      
 0.749
GNB3
G protein subunit beta 3.
    
 0.717
MC3R
Melanocortin 3 receptor.
      
 0.685
RGR
Retinal G protein coupled receptor.
     
 0.644
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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