STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZEB1Zinc finger E-box binding homeobox 1. (1113 aa)    
Predicted Functional Partners:
CDH1
Cadherin 1.
      
 0.837
TWIST1
Twist family bHLH transcription factor 1.
     
 0.770
CDH2
Cadherin 2.
      
 0.760
CTBP1
C-terminal binding protein 1.
   
 
 0.734
CTBP2
C-terminal binding protein 2.
   
 
 0.698
FAM49B
Family with sequence similarity 49 member B.
      
 0.613
CCNA2
Cyclin A2.
      
 0.613
TMEM135
Transmembrane protein 135.
      
 0.613
RUNX1
RUNX family transcription factor 1.
      
 0.611
TWIST2
Twist family bHLH transcription factor 2.
     
 0.572
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.