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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTPAPMitochondrial poly(A) polymerase. (649 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.611
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.588
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.577
TENT4B
Terminal nucleotidyltransferase 4B.
     
 0.573
ENSPCLP00000012536
annotation not available
    
   0.572
BICC1
BicC family RNA binding protein 1.
   
 0.547
CSTF1
Cleavage stimulation factor subunit 1.
   
 
  0.534
CSNK1A1
Casein kinase 1 alpha 1.
     
 0.500
SUPV3L1
Suv3 like RNA helicase.
   
  
 0.494
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
   
  
 0.489
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.