Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DESI2Desumoylating isopeptidase 2. (193 aa)    
Predicted Functional Partners:
METTL14
Methyltransferase like 14.
    
 
 0.727
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
   0.583
METTL3
Methyltransferase like 3.
   
 
 0.581
PSMC2
Proteasome 26S subunit, ATPase 2.
    
   0.563
PSMB1
Proteasome 20S subunit beta 1.
    
   0.563
PSMA4
Proteasome 20S subunit alpha 4.
    
   0.563
PSMC3
Proteasome 26S subunit, ATPase 3.
    
   0.563
PSMC1
Proteasome 26S subunit, ATPase 1.
    
   0.563
PSMA6
Proteasome 20S subunit alpha 6.
    
   0.563
PSMD12
Proteasome 26S subunit, non-ATPase 12.
    
   0.563
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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