STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB2EF-hand calcium binding domain 2. (165 aa)    
Predicted Functional Partners:
GIN1
Gypsy retrotransposon integrase 1.
    
 
 0.856
GALNT2
Polypeptide N-acetylgalactosaminyltransferase 2.
      
 0.771
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.768
ENSPCLP00000005723
annotation not available
    
 
 0.736
MYO3B
Myosin IIIB.
    
 0.661
ENSPCLP00000017999
annotation not available
    
 0.661
MYO3A
Myosin IIIA.
    
 0.661
WDR90
WD repeat domain 90.
    
 
 0.632
MYO9A
Myosin IXA.
    
 0.569
TAX1BP1
Tax1 binding protein 1.
    
 0.569
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.