Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCCPDHSaccharopine dehydrogenase (putative). (434 aa)    
Predicted Functional Partners:
GLRX
Glutaredoxin.
    
   0.692
TMX3
Thioredoxin related transmembrane protein 3.
      
 0.653
AASS
Aminoadipate-semialdehyde synthase.
     
  0.593
TCERG1L
Transcription elongation regulator 1 like.
   
  
 0.576
STOML1
Stomatin like 1.
  
  
 0.561
ALDH5A1
Aldehyde dehydrogenase 5 family member A1.
     
  0.557
ENSPCLP00000011760
annotation not available
      
 0.545
GTPBP2
GTP binding protein 2.
     
  0.504
OLA1
Obg like ATPase 1.
     
  0.504
TMPRSS5
Transmembrane serine protease 5.
     
 0.482
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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